Information about Samples:
Sample_titleWT-16ºC-RepAWT-16ºC-RepBWT-16ºC-RepCelf3-7-16ºC-RepBelf3-7-16ºC-RepCtfl1-1-16ºC-RepAtfl1-1-16ºC-RepBtfl1-1-16ºC-RepCWT-23ºC-RepAWT-23ºC-RepBWT-23ºC-RepCelf3-7-16ºC-RepAelf3-7-23ºC-RepAelf3-7-23ºC-RepBelf3-7-23ºC-RepCtfl1-1-23ºC-RepAtfl1-1-23ºC-RepBtfl1-1-23ºC-RepC
Sample_geo_accessionGSM392180GSM392263GSM392273GSM392274GSM392275GSM392560GSM392683GSM392684GSM392685GSM392686GSM392687GSM392688GSM392689GSM392690GSM392691GSM392692GSM392693GSM392694
Sample_typeRNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNA
Sample_channel_count111111111111111111
Sample_source_name_ch110-day old Columbia (WT) seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m2WT10 d-old, continuous WL, 80 micromoles/sec m2, 16ºC, RepB10-day old Columbia (WT) seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old WT Col seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old WT Col seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old WT Col seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old elf3-7 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m210-day old tfl1-1 seedlings, grown on MS salts agar plates, at 23ºC under continuous cool-white fluorescent light, 80 micromoles/sec m2
Sample_organism_ch1Arabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thaliana
Sample_characteristics_ch1developmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlingsdevelopmental stage: 10-day old seedlings
Sample_characteristics_ch1genotype: Columbia (WT)genotype: Columbia (WT)genotype: Columbia (WT)genotype: elf3-7genotype: elf3-7genotype: tfl1-1genotype: tfl1-1genotype: tfl1-1genotype: Columbia (WT)genotype: Columbia (WT)genotype: Columbia (WT)genotype: elf3-7genotype: elf3-7genotype: elf3-7genotype: elf3-7genotype: tfl1-1genotype: tfl1-1genotype: tfl1-1
Sample_characteristics_ch1growth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 16ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 16ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 23ºCgrowth conditions: 23ºC
Sample_growth_protocol_ch1Seed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/NSeed sterilization: clorine vapour O/N
Sample_growth_protocol_ch1Plating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % AgarPlating: MS Salts, 1.2 % Agar
Sample_growth_protocol_ch1Stratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºCStratification: 3 days at 4ºC
Sample_growth_protocol_ch1Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 16ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2Growth conditions: 10 days at 23ºC, under continuous cool-white fluorescent light, 80 micromoles/sec m2
Sample_molecule_ch1total RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNA
Sample_extract_protocol_ch1Qiagen RNAeasy kitQiagen RNAeasy KitQiagen RNAeasy KitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kitQiagen RNAeasy kit
Sample_label_ch1biotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotin
Sample_label_protocol_ch1AffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrix
Sample_taxid_ch1370237023702370237023702370237023702370237023702370237023702370237023702
Sample_hyb_protocolAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrix
Sample_scan_protocolAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrixAffymetrix
Sample_description10-day old Columbia (WT) seedlings, grown on MS salts agar plates, at 16ºC under continuous cool-white fluorescent light, 80 micromoles/sec m2WT Columbia seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenWT Columbia seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenWT Col seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenWT Col seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenWT Col seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 16ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogenelf3-7 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogentfl1-1 seeds were sterilized overnight by exposure to clorine vapour in a close container. Afterwards seeds were plated on MS salts, Agar 1.2%, and stratified for 3 days in the dark at 4ºC. Plates were moved to a plant incubator and grown for ten days at 23ºC, under continuous cool fluorescent light of 80 micromoles/sec m2. Then seedlings were harvested an inmediately frozen in liquid nitrogen
Sample_platform_idGPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198