Information about Samples:
Sample_title00h Col-0 replicate A00h Col-0 replicate B00h Col-0 replicate C04h Col-0 replicate A04h Col-0 replicate B04h Col-0 replicate C08h Col-0 replicate A08h Col-0 replicate B08h Col-0 replicate C12h Col-0 replicate A12h Col-0 replicate B12h Col-0 replicate C16h Col-0 replicate A16h Col-0 replicate B16h Col-0 replicate C20h Col-0 replicate A20h Col-0 replicate B20h Col-0 replicate C
Sample_geo_accessionGSM77055GSM77056GSM77057GSM77058GSM77059GSM77060GSM77061GSM77062GSM77063GSM77064GSM77065GSM77066GSM77067GSM77068GSM77069GSM77070GSM77071GSM77072
Sample_typeRNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNARNA
Sample_channel_count111111111111111111
Sample_source_name_ch1full rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosettefull rosette
Sample_organism_ch1Arabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thalianaArabidopsis thaliana
Sample_characteristics_ch1Wild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without rootsWild type,Col-0, full rosette, without roots
Sample_molecule_ch1total RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNAtotal RNA
Sample_extract_protocol_ch15 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.5 x 3 rosettes were harvested and directly frozen by liquid nitrogen, inside the growth chamber. The material of 15 rosettes was ground in liquid nitrogen.Total RNA was extracted from 250 mg fresh weight using 5 ml TriZol. Organic compounts were removed by 2 chloroform extractions. Precipitation was done with sodium chloride/sodium citrate/2-propanol over night at 4°C. Ethanol wash of RNA pellet was done twice with 75% Ethanol. Total RNA was dissolved in pure H2O.
Sample_label_ch1biotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotinbiotin
Sample_label_protocol_ch1Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.
Sample_taxid_ch1370237023702370237023702370237023702370237023702370237023702370237023702
Sample_hyb_protocolstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix procedures
Sample_scan_protocolstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix proceduresstandard Affymetrix procedures
Sample_descriptionWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettesWild type Arabidopsis thaliana Col-0 5-6 week old rosettes
Sample_platform_idGPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198GPL198